Hotels in Junction City

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Where to stay in Junction City?

Properties are selected based on real traveler reviews and popularity among guests who’ve booked a night in Junction City on Hotels.com. These Junction City hotels consistently deliver on quality, location and traveler experience. Last updated on .

1. Baymont Inn and Suites by Wyndham Farmington, MO

Baymont Inn and Suites by Wyndham Farmington, MO
2.5 star property
Farmington
8.0 out of 10, Very good, (1,003 reviews)
Unwind in this quiet hotel where comfortable beds ensure a restful sleep. The 24-hour fitness center and seasonal outdoor pool add vacation vibes, while free breakfast and parking enhance value. Helpful staff and clean rooms earn top marks from travelers.
$54 nightly
The price is $62
Nov 19 - Nov 20
Total with taxes and fees
Baymont Inn and Suites by Wyndham Farmington, MO

2. Madison Inn Lodge

Madison Inn Lodge
2.5 star property
Fredericktown
7.6 out of 10, Good, (314 reviews)
Enjoy tranquil surroundings at this well-maintained Fredericktown lodge featuring a seasonal outdoor pool. Complimentary weekend continental breakfast, WiFi, and parking enhance your stay. Located within driving distance of Arcadia Valley Station for regional exploration.
$87 nightly
The price is $95
Nov 15 - Nov 16
Total with taxes and fees
Madison Inn Lodge

3. Crown Pointe Lodge, BW Signature Collection

Crown Pointe Lodge, BW Signature Collection
2.5 star property
Farmington
8.8 out of 10, Excellent, (703 reviews)
Tee off at the 18-hole course, then unwind in the indoor pool and hot tub at this welcoming Farmington escape. Near Crown Pointe Golf Club, this hotel offers free breakfast, WiFi, parking, and a fitness center with terrace views.
$101 nightly
The price is $116
Nov 19 - Nov 20
Total with taxes and fees
Crown Pointe Lodge, BW Signature Collection

4. Holiday Inn Express & Suites Perryville by IHG

Holiday Inn Express & Suites Perryville by IHG
2.5 star property
Perryville
9.2 out of 10, Wonderful, (645 reviews)
Close to Perryville Country Club and Saint Marys Lake, this hotel offers free breakfast, WiFi, and parking. Guests love the helpful staff and clean rooms. Take a morning swim or workout at any hour during your business trip or leisure getaway.
$99 nightly
The price is $113
Dec 13 - Dec 14
Total with taxes and fees
Holiday Inn Express & Suites Perryville by IHG

5. Shepherd Mountain Inn

Shepherd Mountain Inn
2.5 star property
Ironton
9.2 out of 10, Wonderful, (339 reviews)
Shepherd Mountain Inn offers tranquil accommodations minutes from Arcadia Valley Station. Unwind at the on-site restaurant and bar after exploring the nearby bike park and historic Pilot Knob site. Guests praise the attentive staff and pristine rooms.
$137 nightly
The price is $150
Nov 16 - Nov 17
Total with taxes and fees
Shepherd Mountain Inn

6. Microtel Inn & Suites by Wyndham Sainte Genevieve

Microtel Inn & Suites by Wyndham Sainte Genevieve
2.5 star property
Ste Genevieve
8.8 out of 10, Excellent, (682 reviews)
Experience tranquil stays in Ste Genevieve, where clean rooms and helpful staff earn top marks. Explore nearby Historic District, then enjoy free breakfast, WiFi and parking. This quiet hotel provides the perfect base for discovering local museums.
$86 nightly
The price is $102
Nov 29 - Nov 30
Total with taxes and fees
Microtel Inn & Suites by Wyndham Sainte Genevieve

7. EC Reed's Mercantile and Hotel

EC Reed's Mercantile and Hotel
3.0 star property
Marble Hill
9.4 out of 10, Exceptional, (118 reviews)
Adventure seekers can explore nearby hiking trails, kayaking, and rafting, then return to this welcoming hotel. Enjoy free continental breakfast, WiFi, and parking, plus exceptional service from the staff that guests consistently praise.
$117 nightly
The price is $127
Nov 15 - Nov 16
Total with taxes and fees
EC Reed's Mercantile and Hotel

8. Super 8 by Wyndham Perryville

Super 8 by Wyndham Perryville
2.0 star property
Perryville
8.6 out of 10, Excellent, (1,000 reviews)
Wake up to a complimentary meal at this friendly motel in Perryville. Energize with a workout in the 24-hour fitness center or take a refreshing dip in the indoor pool. Near Perryville Country Club and Saint Marys Lake with free WiFi and parking.
$65 nightly
The price is $75
Nov 29 - Nov 30
Total with taxes and fees
Super 8 by Wyndham Perryville

9. Super 8 by Wyndham Farmington

Super 8 by Wyndham Farmington
2.0 star property
Farmington
8.0 out of 10, Very good, (691 reviews)
Enjoy free breakfast and WiFi at this welcoming motel with a seasonal outdoor pool. Located close to Farmington Mineral Area Shopping Center and Dean Danieley Park, guests praise the helpful staff who ensure a comfortable stay.
$60 nightly
The price is $68
Nov 19 - Nov 20
Total with taxes and fees
Super 8 by Wyndham Farmington

10. Holiday Inn Express & Suites Farmington by IHG

Holiday Inn Express & Suites Farmington by IHG
2.5 star property
Farmington
8.6 out of 10, Excellent, (445 reviews)
Escape to this Farmington hotel offering an indoor pool for year-round swimming and complimentary breakfast to start your day. Close to Mineral Area Shopping Center and Dean Danieley Park, the friendly staff gets top marks from guests. Free WiFi and parking complete the experience.
$111 nightly
The price is $127
Dec 13 - Dec 14
Total with taxes and fees
Holiday Inn Express & Suites Farmington by IHG

11. Quality Inn Farmington

Quality Inn Farmington
2.5 star property
Farmington
7.6 out of 10, Good, (938 reviews)
Nestled in Farmington with easy access to Wilson Rozier and Bicentennial Parks, this hotel provides free breakfast, WiFi, and parking. Enjoy the indoor pool after a day on nearby trails. Guests rave about clean rooms and helpful staff.
$67 nightly
The price is $76
Nov 15 - Nov 16
Total with taxes and fees
Quality Inn Farmington

12. The Atrium - A Boutique Hotel

The Atrium - A Boutique Hotel
2.0 star property
Perryville
9.6 out of 10, Exceptional, (15 reviews)
$98 nightly
The price is $112
Nov 14 - Nov 15
Total with taxes and fees
The Atrium - A Boutique Hotel

13. Triangle Inn Motel

Triangle Inn Motel
2.0 star property
Ste Genevieve
8.2 out of 10, Very good, (76 reviews)
Minutes from Mississippi River, this welcoming hotel offers free WiFi and parking. Explore the Ste Genevieve Historic District and Museum Learning Center nearby, with convenient 24-hour front desk service for any needs during your stay.
Triangle Inn Motel

14. Rosener's Inn and banquet center

Rosener's Inn and banquet center
2.0 star property
Park Hills
5.2 out of 10, (49 reviews)
Tucked in Park Hills, this welcoming motel offers free WiFi and parking for hassle-free convenience. Columbia Park and Missouri Mines Historic Site are nearby, making exploration easy after refreshing daily housekeeping service.
$100 nightly
The price is $110
Nov 14 - Nov 15
Total with taxes and fees
Rosener's Inn and banquet center

15. Hampton Inn Farmington

Hampton Inn Farmington
2.5 star property
Farmington
8.8 out of 10, Excellent, (583 reviews)
Morning swims in the indoor pool or workouts at the 24-hour fitness center start your day right. Located near Farmington Mineral Area Shopping Center and Dean Danieley Park, this hotel offers free breakfast, WiFi, and parking. Guests consistently praise the helpful staff.
$104 nightly
The price is $119
Dec 13 - Dec 14
Total with taxes and fees
Hampton Inn Farmington

16. Super 8 by Wyndham Bonne Terre

Super 8 by Wyndham Bonne Terre
2.0 star property
Bonne Terre
7.0 out of 10, Good, (592 reviews)
Wake up to free breakfast before exploring Bonne Terre Mine or diving into the indoor pool. Located near hiking trails and St. Francois State Park, this hotel provides comfortable rooms with free WiFi and parking.
$61 nightly
The price is $67
Nov 15 - Nov 16
Total with taxes and fees
Super 8 by Wyndham Bonne Terre

17. Perryville RV Resort

Perryville RV Resort
2.0 star property
Perryville
8.8 out of 10, Excellent, (8 reviews)
$81 nightly
The price is $93
Nov 15 - Nov 16
Total with taxes and fees
Perryville RV Resort

18. Urban Lofts

Urban Lofts
3.0 star property
Perryville
9.4 out of 10, Exceptional, (22 reviews)
Stylish lofts near Feltz Street Park combine comfort with convenience. Each apartment features a full kitchen, washer/dryer, and plush memory foam beds. Enjoy free WiFi and parking while exploring nearby Perryville Country Club attractions.
$295 nightly
The price is $338
Nov 14 - Nov 15
Total with taxes and fees
Urban Lofts

19. Fort Davidson Hotel

Fort Davidson Hotel
2.5 star property
Ironton
9.2 out of 10, Wonderful, (190 reviews)
Escape to this welcoming hotel featuring an outdoor pool, free parking, and convenient train station pickup. Explore nearby Fort Davidson State Historic Site and Battle of Pilot Knob Museum, all while enjoying complimentary WiFi throughout your stay.
$125 nightly
The price is $137
Nov 14 - Nov 15
Total with taxes and fees
Fort Davidson Hotel

20. Days Inn by Wyndham Perryville

Days Inn by Wyndham Perryville
2.0 star property
Perryville
7.0 out of 10, Good, (464 reviews)
This countryside hotel offers a refreshing seasonal outdoor pool plus convenient freebies including WiFi, parking, and daily on-the-go breakfast. Located near Saint Marys Lake, it provides easy access to local attractions while serving as a practical business-friendly base.
$71 nightly
The price is $82
Nov 15 - Nov 16
Total with taxes and fees
Days Inn by Wyndham Perryville
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Check out reviews of Junction City hotels guests love

Frequently asked questions

How much does a hotel room cost in Junction City?
You can choose a great hotel in Junction City from $62 with properties to suit all budgets and needs. To find an affordable hotel in Junction City that meets all of your requirements, just apply filters on Hotels.com and sort hotels by "Price: low to high".
How can I find deals and earn rewards at Junction City hotels?
Discover great deals on Junction City hotel stays with Hotels.com. It's also a good idea to look at hotel prices mid-week or during the low season as you're likely to find off-peak deals. If it's a spontaneous trip, check out our last-minute deals on Junction City hotels.
Can I book Junction City hotels with free cancellation?
To book a refundable Junction City hotel on Hotels.com, just filter hotels by "Property cancellation options" and select "Fully refundable property". Many hotels offer free cancellation, so you can receive a refund if you need to cancel. Some hotels do require cancelling more than 24 hours before check-in, so double-check your booking beforehand.
What hotels do travelers like in Junction City?
Guests like Madison Inn Lodge.
Can I book a refundable accommodation in Junction City?
If you need the flexibility to change your travel plans to Junction City, most hotels offer refundable* bookable rates. You can find these properties by searching our site and using the "fully refundable" filter to narrow the results down.
What will the weather in Junction City be like during my vacation?
The warmest months in Junction City are usually July and August with an average temp of 75°F. January and February are the chilliest months when the average temp is 38°F. The rainiest months are April and May.
Why should I book my Junction City hotel with Hotels.com?
There are plenty of reasons to book your Junction City travel with us: our free cancellations on selected hotels gives you the flexibility you're looking for, and with One Key™, our rewards program, you will be able to earn and use OneKeyCash™* on all eligible bookings such as hotels, car rentals, flights, vacation rentals and more on Hotels.com, Expedia and Vrbo.

Find out more about Junction City

Where History Meets Nature: Discover the Soul of Junction City

Nestled in the heart of Missouri, Junction City offers travelers a delightful blend of history and natural beauty. This charming town is known for its scenic urban parks, perfect for leisurely strolls or picnics. Explore the rich heritage at historic sites, then venture to nearby national and state parks for hiking and outdoor adventures. With a welcoming atmosphere, Junction City invites visitors to unwind in cozy vacation rentals and enjoy local dining. Whether you’re seeking a peaceful retreat or a cultural escape, Junction City is a hidden gem waiting to be discovered.

Discover great hotels near Junction City

Junction City offers a variety of hotel accommodations to suit every traveler's needs. From budget-friendly options to comfortable mid-range stays, you'll find convenient locations that make exploring the area easy. Look for cozy hotel rooms and potential hotel deals to enhance your visit. Here are some of our travelers' favorite hotels near Junction City:

  1. Madison Inn LodgeOpens in a new window: This budget-friendly motel offers a comfortable and inviting stay, perfect for travelers seeking a cozy retreat. With pet-friendly accommodations, it caters to those looking to travel with their furry companions, ensuring a seamless experience for pet owners. Guests appreciate the accommodating atmosphere and the range of amenities designed to enhance their visit. The positive sentiments highlight the welcoming nature of the property, making it an excellent choice for a relaxed getaway.
  2. Baymont Inn and Suites by Wyndham FarmingtonOpens in a new window: Baymont Inn and Suites by Wyndham Farmington is an excellent choice for leisure travelers who value comfort and convenience. With a strong guest rating of 8.0 out of 10, this hotel stands out for its clean and quiet rooms, friendly staff, and a prime location that makes exploring the area easy. Families and solo travelers alike can take advantage of the child-friendly amenities while enjoying a peaceful stay. The overall experience is characterized by cleanliness and attentive service, ensuring that every guest feels at home.
  3. Quality Inn FarmingtonOpens in a new window: This budget-friendly option is ideal for adventure seekers looking to explore the natural beauty surrounding Junction City. Quality Inn Farmington offers easy access to hiking and biking activities just a stone's throw away, allowing guests to immerse themselves in outdoor recreation. The spacious and clean accommodations provide a comfortable retreat after a day of exploring. The positive reviews reflect a commitment to guest satisfaction, making it a preferred choice for those seeking an adventurous getaway.

Where to stay in Junction City

Some of the best areas to stay near Junction City, Missouri, are Fredericktown, Marquand, and Central Fredericktown. Fredericktown offers family-friendly attractions and charming local shops. Marquand is known for its outdoor activities and scenic beauty. Central Fredericktown provides easy access to dining and cultural sites. For first-time visitors, Fredericktown is the most appealing choice.

  1. FredericktownOpens in a new window: Fredericktown is a charming destination that offers a family-friendly atmosphere with a rich history and numerous outdoor activities. Visitors can enjoy local parks that are perfect for picnics and leisurely strolls. The town often hosts community events, providing a great way to engage with locals and experience the warmth of small-town life. For those who enjoy shopping, the quaint downtown area features unique boutiques where you can find handmade crafts and gifts. With its welcoming vibe and scenic surroundings, Fredericktown is an excellent choice for travelers looking to unwind and explore the beauty of rural Missouri.
  2. Central FredericktownOpens in a new window: Central Fredericktown is ideally situated for travelers seeking convenience and accessibility. This area boasts a variety of shops and local eateries, making it easy to grab a bite or pick up souvenirs. The town is also known for its cultural attractions, including local art exhibits and seasonal festivals that celebrate the community's heritage. Central Fredericktown's friendly atmosphere and central location make it a great base for exploring nearby attractions and enjoying a taste of small-town charm.
  3. MarquandOpens in a new window: Marquand is a delightful little town that provides a peaceful escape for visitors looking to enjoy nature and tranquility. Surrounded by picturesque landscapes, Marquand is perfect for those who love hiking and exploring outdoor trails. The community is known for its friendly locals and offers a relaxed environment, making it an ideal spot for a laid-back getaway. While smaller than its neighbors, Marquand’s charm lies in its simplicity and the opportunity to connect with nature and the community.

Things to do in and around Junction City

Junction City is an inviting destination where urban parks meet charming town vibes. Enjoy outdoor activities like hiking through lush forests, or unwind at serene lakes. With diverse shopping options and leisurely rounds of golf, this vibrant locale promises a refreshing escape and memorable experiences for every traveler.

  • Elephant Rocks State ParkOpens in a new window – Explore the striking granite boulders that resemble a herd of elephants at this national state park. Hike along scenic trails and enjoy a family-friendly environment where you can picnic and take in the stunning natural beauty.
  • Fort Davidson State Historic SiteOpens in a new window – Step back in time at this historic fort, which played a crucial role during the American Civil War. Walk the grounds, visit the informative museum, and learn about the history of the area through engaging exhibits and reenactments.
  • Millstream Gardens Conservation AreaOpens in a new window – Discover this serene preserve teeming with natural beauty. Stroll along the peaceful trails, marvel at the diverse plant life, and enjoy birdwatching in this tranquil setting that invites you to connect with nature.
  • Madison County CourthouseOpens in a new window – Admire the architectural splendor of this historic civic building. Take a moment to appreciate the intricate details and learn about its significance in the community's history. It’s a great spot for photography and a short break from your adventures.
  • Columbia ParkOpens in a new window – Spend a relaxing afternoon at this charming park, perfect for families and friends. Enjoy the playgrounds, walk the trails, or have a leisurely picnic amidst the lush greenery. It's an ideal spot to unwind and soak in the local atmosphere.

5 tips for savvy savings when booking a hotel in Junction City

  1. Book for the cheapest times: The most budget-friendly time to visit Junction City is during January, February, and December when hotel prices are lower. For those looking to explore the city’s key landmarks, cultural sites, and historical attractions, a stay of at least 2 to 3 days is recommended. You can enjoy various sites including historic buildings, museums, and urban parks that showcase the area’s rich heritage, all while taking advantage of great value for money. This timing not only allows for a deeper appreciation of the local culture but also offers potential savings, as prices may drop during these months.
  2. Instant discounts. Rewards for later: Save up to 20% instantly on hundreds of thousands of properties with Member Discounts. Then earn rewards on eligible stays to use on future trips. Book once, win twice, get instant discounts and rewards. Join for freeOpens in a new window.
  3. Score last-minute deals on Hotels.com: Last-minute travel doesn't mean last-minute stress. Hotels.com's Last-Minute DealsOpens in a new window offer discounted rates close to your travel date, so the later you leave it, the more you could save. Turn on push notifications and you'll be the first to know when dealsOpens in a new window drop for Junction City.
  4. Book with confidence, not guesswork: Prices in Junction City shift with the season, local events, and how far out you book — but you don't have to guess. Hotels.com shows you the full price upfront with no surprises at checkout, and our price tracker tells you whether your dates are above or below average. So if you're flexible, you can shift your trip by a day or two to avoid peak season prices, compare pricesOpens in a new window and know you're getting a good deal before you commit.
  5. Think beyond the city center: Central hotels may come with a central price tag. A well-connected neighborhood a little further out may cut your hotel bill and can often give you a more local experience. Use Hotels.com's map view to find the sweet spot between location and value, and filter by price to see what's available across Junction City.

Best time to go to Junction City

Junction City experiences its lowest average temperature in January, at 33.3°F (0.7°C), while July is the hottest month, with an average temperature of 78.1°F (25.6°C). April is usually the wettest month. June to August are the peak travel months in Junction City, attracting a higher number of tourists. During this peak period, the weather is mostly sunny, accompanied by light rainfall. On the other hand, January, February, and December tend to be quieter times to visit, marked by light rainfall and mostly sunny conditions.

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